WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00132068 Gene Name  CJA12864
Sequence Name  ? CJA12864 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable antiporter activity. Predicted to be involved in proton transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans F41E7.2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA12864b.1 CJA12864b.1   [unknown]
Transcript:CJA12864c.1 CJA12864c.1   [unknown]
Transcript:CJA12864a.1 CJA12864a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA12864c CJA12864c   [unknown]
CDS:CJA12864a CJA12864a   [unknown]
CDS:CJA12864b CJA12864b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA25217, TGGATTCGTGGTAGCTACAGTATCACCAGCTGTGGGAATGCCAACAATGCTTAGAATCAA, WBGene00180789   Expr1072092 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA12864, AAAATTGGCATTACGGGATCGAATACCACGGATAGTCGAACAATTTACGAGCTCAACCCG, WBGene00132068   Expr1085858 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region