WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00132739 Gene Name  Cjp-dgn-1
Sequence Name  ? CJA13535 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable calcium ion binding activity. Predicted to be located in membrane. Predicted to be part of dystrophin-associated glycoprotein complex. Is an ortholog of C. elegans dgn-1. In C. elegans, dgn-1 is involved in anatomical structure morphogenesis; inductive cell migration; and positive regulation of locomotion. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA13535.1 CJA13535.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA13535 CJA13535   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-dgn-1, GAAGAAGTCGTCAAGCACAGAATATGTAGCCAAGGGACTTCCAGTTGTCTTCCCAGATGA, WBGene00132739   Expr1078135 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  part_of
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  part_of
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region