WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00133267 Gene Name  Cjp-nsy-1
Sequence Name  ? CJA14063 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans nsy-1. In C. elegans, nsy-1 is involved in several processes, including determination of adult lifespan; positive regulation of macromolecule biosynthetic process; and response to stress. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA14063b.1 CJA14063b.1   [unknown]
Transcript:CJA14063a.1 CJA14063a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14063a CJA14063a   [unknown]
CDS:CJA14063b CJA14063b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-nsy-1, ATGAGAAGCCGTGATGATTCGCTGGACGATTATCACTCTTCAAGTGCCGATGACATGTTT, WBGene00133267   Expr1080894 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region