WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00134007 Gene Name  Cjp-acs-20
Sequence Name  ? CJA14803 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in protein glycosylation. Is an ortholog of C. elegans acs-20. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA14803.1 CJA14803.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14803 CJA14803   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA26552, CATCAATTATCGACAAGTCGAGGCCTTGTTCAGAACACCGGGAATGGCTCAAAACTCAGA, WBGene00182124   Expr1072473 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA20352, CAAACGGCGAATTGGCGGAAGCCGAAGCCGTTGGCCACAGATGTTCTCGAAAAACCGGCT, WBGene00175924   Expr1075318 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-acs-20, TTCGCTCACCAGCTACGCCATCCCGCAGTTCATTCGAATTTGTGAGGATGTCGAGAAAAC, WBGene00134007   Expr1088250 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-dpm-3, ACGGAGTCGCCACTTTTAATGATTGCTCTGCTGCCGCGGAAGAACTTGTAAAAGAAATTA, WBGene00120703   Expr1079598 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region