WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00136839 Gene Name  Cjp-ogdh-1
Sequence Name  ? CJA17635 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor and thiamine pyrophosphate binding activity. Is an ortholog of C. elegans ogdh-1. In C. elegans, ogdh-1 is involved in protein folding. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA17635.1 CJA17635.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA17635 CJA17635   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA17635, GCCGCCAAGTCACCATGCCATTCCGCAAGCCAGCCATAGTCTTTTCCCCGAAATCGCTTC, WBGene00136839   Expr1077227 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region