WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00137215 Gene Name  Cjp-cku-70
Sequence Name  ? CJA18010 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable damaged DNA binding activity and telomeric DNA binding activity. Predicted to be involved in double-strand break repair via nonhomologous end joining and telomere maintenance. Predicted to be located in nucleus. Predicted to be part of Ku70:Ku80 complex. Is an ortholog of C. elegans cku-70. In C. elegans, cku-70 is involved in DNA repair. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA18010.1 CJA18010.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA18010 CJA18010   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-cku-70, AATCGAGTGGATAGAGAGGTTTCAGTGATCTCGCCGAAAATTATTCAGCCTAATGATCAG, WBGene00137215   Expr1082378 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  located_in
  involved_in
  part_of
  enables
  enables

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  located_in
  involved_in
  part_of
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region