WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00137489 Gene Name  Cjp-dus-2
Sequence Name  ? CJA18285 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable flavin adenine dinucleotide binding activity and tRNA dihydrouridine synthase activity. Predicted to be involved in tRNA processing. Is an ortholog of C. elegans dus-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA18285b.1 CJA18285b.1   [unknown]
Transcript:CJA18285a.1 CJA18285a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA18285a CJA18285a   [unknown]
CDS:CJA18285b CJA18285b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA18285, GAAAGCAGAATAAGAAGCGATTTCGAACAGATGAATTTGGCATCCTGAACGTTGACATCT, WBGene00137489   Expr1086125 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region