WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00138329 Gene Name  CJA19123
Sequence Name  ? CJA19123 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable actin binding activity. Predicted to be involved in actin filament depolymerization. Predicted to be located in actin cytoskeleton. Is an ortholog of C. elegans F53E2.2 and unc-60. In C. elegans, unc-60 is involved in several processes, including actin filament-based process; embryo development; and positive regulation of actin filament polymerization. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA19123.1 CJA19123.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA19123 CJA19123   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-unc-60, CGGAGTCAGTGTTCACCCAGATGTGCCAGCTACTTTCCAAAAATTGTCAGAGGGAAAGAA, WBGene00138329   Expr1085286 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  located_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region