WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00138385 Gene Name  Cjp-crt-1
Sequence Name  ? CJA19181 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable calcium ion binding activity and unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans crt-1. In C. elegans, crt-1 is involved in several processes, including determination of adult lifespan; hemidesmosome assembly; and response to stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA19181.1 CJA19181.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA19181 CJA19181   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-crt-1, AGATTAAGAATCCAGCCTATAAGGGCAAGTGGATCCACCCAGAGATTGAGAACCCAGAGT, WBGene00138385   Expr1076710 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region