WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00138446 Gene Name  Cjp-pitp-1
Sequence Name  ? CJA19241 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable metal ion binding activity and phospholipid transporter activity. Predicted to be involved in phospholipid transport. Is an ortholog of C. elegans pitp-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA19241.1 CJA19241.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA19241 CJA19241   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA19241, GGTCCCGGAAAATGCGGGCAGTACACGTTCAAAATCTATCATGTTGGAAGTCGAATTCCA, WBGene00138446   Expr1088088 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA07880, TAAATTCCGGACAATGCGCACTTGGACAGCGGATTGAGGACGACGCGATGACGTTGCAGT, WBGene00127084   Expr1079324 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA27526, CAATGAGACGTATAATGAGTTTATCGCGTCGCAGCCAATGTTTAATGGTGACGTTTTTGT, WBGene00183098   Expr1078122 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region