WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00143835 Gene Name  Cbn-prp-19
Sequence Name  ? CBN05110 Organism  Caenorhabditis brenneri
Automated Description  Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in DNA repair; mRNA splicing, via spliceosome; and protein ubiquitination. Predicted to be part of Prp19 complex. Is an ortholog of C. elegans prp-19. In C. elegans, prp-19 is involved in nuclear mRNA surveillance. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis brenneri 135651

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBN05110.1 CBN05110.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBN05110 CBN05110   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  part_of
  involved_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region