WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00176402 Gene Name  CJA20830
Sequence Name  ? CJA20830 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in signal peptide processing. Predicted to be located in membrane. Predicted to be part of signal peptidase complex. Is an ortholog of C. elegans mrg-1. In C. elegans, mrg-1 is involved in several processes, including protein localization to euchromatin; regulation of gene expression; and sexual reproduction. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA20830.1 CJA20830.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA20830 CJA20830   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA18943, GAAGACTATCAAGCGGCCACATCGGAATACTATAGACGCGCTCAGACGATCGAAGAAGAG, WBGene00138147   Expr1085689 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA20830, GGACAAAAAGGTGACAGTGGTGAACAAGTGGGACGGTCCGACCGTCAAAAATACACTCGA, WBGene00176402   Expr1081509 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  located_in
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  located_in
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region