WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00177693 Gene Name  Cjp-cox-10
Sequence Name  ? CJA22121 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable protoheme IX farnesyltransferase activity. Predicted to be involved in heme biosynthetic process. Predicted to be located in membrane. Is an ortholog of C. elegans cox-10. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA22121.1 CJA22121.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA22121 CJA22121   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA22121, GTGTAATCAGCTGCTCGAGGCTCCGTACGATGCACAAATGCGACGGACGCAAGGCAGAGT, WBGene00177693   Expr1087642 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA00432, TGGCAATTTCCACATTTCAATGGGTTGAGTTGGAATTTGAGAGGCGATTATAGCAAGGTG, WBGene00119636   Expr1083060 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region