WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00178056 Gene Name  Cjp-gei-17
Sequence Name  ? CJA22484 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable zinc ion binding activity. Is an ortholog of C. elegans gei-17. In C. elegans, gei-17 is involved in several processes, including meiotic metaphase I homologous chromosome alignment; protein sumoylation; and regulation of cellular response to stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA22484b.1 CJA22484b.1   [unknown]
Transcript:CJA22484a.1 CJA22484a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA22484a CJA22484a   [unknown]
CDS:CJA22484b CJA22484b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA22484, TTCTGCACAACTTTAACTCGAATCCGACGATGGTCCAGCATCTTCAGCAGCAGCAACAAT, WBGene00178056   Expr1084599 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA05806, GAAAAAGTCGCACAATAGCAACGATATCGAGATTATCACGCTCGATGACACGCCGCCACG, WBGene00125010   Expr1070473 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-gei-17, AAGAAACGAAACGCGAGGTGATTCAAAAGTTGACGGGTGGCGGTGAGGATGATATAGCGA, WBGene00178328   Expr1070728 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA27775, TCACCACAATTCCAAATGCAAAACGGACTGATTGGACGGGCGAATCAGATGGCTCAGAAC, WBGene00183348   Expr1072667 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region