WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00178321 Gene Name  CJA22749
Sequence Name  ? CJA22749 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity; ATPase-coupled intramembrane lipid transporter activity; and magnesium ion binding activity. Predicted to be involved in phospholipid transport. Predicted to be located in membrane. Is an ortholog of C. elegans tat-3. In C. elegans, tat-3 is involved in sterol metabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA22749.1 CJA22749.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA22749 CJA22749   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA28606, AATAAAAAGCCCATTCAGACGATCGGTGGACAAACGTGGCTCTACAGACGTCATTACACC, WBGene00184180   Expr1087103 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA23980, CACGGTACAAGCGCAGCTCTCTGGAGAAAATGACAAACATTGACATTTTGTGGAGTGTGT, WBGene00179552   Expr1072674 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA22749, TCAATATCACGGAAGAGCTCGGGCAGATTCAGTATGTAATGTCTGATAAGACTGGAACGC, WBGene00178321   Expr1081580 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  enables
  located_in

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region