WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00178451 Gene Name  Cjp-gcy-28.2
Sequence Name  ? CJA22879 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable protein kinase activity. Predicted to be located in membrane. Is an ortholog of C. elegans gcy-28. In C. elegans, gcy-28 is involved in chemotaxis; olfactory behavior; and sensory perception. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA22879.1 CJA22879.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA22879 CJA22879   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA22879, TTCCTCCATAACAGCGAAATCAGATCACACGGCCGTCTAAAATCATCGAATTGCGTTGTC, WBGene00178451   Expr1086123 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA07654, AAGACCTGGCGATTGGAAGGGAGACGTTTAAGCAATGGTTGCGTGATATATCGTATCAAT, WBGene00126858   Expr1089009 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA03517, TAAGTGAAAAAACCCCTGTACGTCACTCAAACTTAACACCATTCCAGGGCTACCCGCTAC, WBGene00122721   Expr1089013 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region