WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00179484 Gene Name  Cjp-gon-2
Sequence Name  ? CJA23912 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans gon-2. In C. elegans, gon-2 is involved in defecation; gonad development; and mitotic cell cycle. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA23912a.1 CJA23912a.1   [unknown]
Transcript:CJA23912b.1 CJA23912b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA23912a CJA23912a   [unknown]
CDS:CJA23912b CJA23912b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA23912, AGAAGAGTTGGAGGATATTGAAGAGGAAGAGGAAGACGACGGACATTTGACAATGCATCC, WBGene00179484   Expr1075219 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-gon-2, GCAAACCCTTCAACTATTGACCTACGAACTTTCAAACTGGAGTAACGAAACCTGTCTGGC, WBGene00121638   Expr1080429 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region