WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00179507 Gene Name  CJA23935
Sequence Name  ? CJA23935 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA helicase activity. Predicted to be involved in DNA repair and telomere maintenance. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA23935b.1 CJA23935b.1   [unknown]
Transcript:CJA23935c.1 CJA23935c.1   [unknown]
Transcript:CJA23935a.1 CJA23935a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA23935a CJA23935a   [unknown]
CDS:CJA23935b CJA23935b   [unknown]
CDS:CJA23935c CJA23935c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA23935, TCAAAGAACTCCAGCGGAAATGCATCCTCTGCACATTCGCCACCGGATCCAACAAAGGAA, WBGene00179507   Expr1083510 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA03676, GACAGACATACGTTGCTCTTTCCCGGGCCAGATCAAAGAATGAGCTCTTCATCAAATCTT, WBGene00122880   Expr1072442 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region