WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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Gene :

WormBase Gene ID  ? WBGene00182774 Gene Name  Cjp-pas-2
Sequence Name  ? CJA27202 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome core complex, alpha-subunit complex. Is an ortholog of C. elegans pas-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA27202.1 CJA27202.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA27202 CJA27202   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-pas-2, TGGAAAGCAACCGCTCTCGGAAAGAACGACGTTAACGCGAAGACGTTCCTCGAAAAACGA, WBGene00182774   Expr1076138 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  part_of
  part_of
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  part_of
  part_of
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region