WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00206642 Gene Name  CJA30795
Sequence Name  ? CJA30795 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in intracellular protein transport and vesicle fusion with Golgi apparatus. Predicted to be located in Golgi membrane. Is an ortholog of C. elegans uso-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA30795b.1 CJA30795b.1   [unknown]
Transcript:CJA30795a.1 CJA30795a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA30795a CJA30795a   [unknown]
CDS:CJA30795b CJA30795b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-uso-1, ATCAGCACAATAAGATGTCGGTATACCGTCGTCGTCTTAAGTCTCTCGGACAGCCAGTGA, WBGene00122251   Expr1091913 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  involved_in
  located_in
  located_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  involved_in
  located_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region