WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00216695 Gene Name  Cjp-gnrr-2
Sequence Name  ? CJA40847 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans gnrr-2. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA40847a.1 CJA40847a.1   [unknown]
Transcript:CJA40847d.1 CJA40847d.1   [unknown]
Transcript:CJA40847b.1 CJA40847b.1   [unknown]
Transcript:CJA40847c.1 CJA40847c.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA40847d CJA40847d   [unknown]
CDS:CJA40847c CJA40847c   [unknown]
CDS:CJA40847b CJA40847b   [unknown]
CDS:CJA40847a CJA40847a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA19586, GTGGTGAATATCTATGCAAATTCATGAGATTCGTCGATGCGTTTGTGTTTGCGATAAGGT, WBGene00175157   Expr1072022 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA22023, ATCATCATTTTTTATATTCCATTGATGATTCTCGTCGCGTGCTATGTGCTCATTTTGAAG, WBGene00177595   Expr1079398 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  located_in
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region