WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00222267 Gene Name  Bma-mel-11
Sequence Name  ? Bm2006 Organism  Brugia malayi
Automated Description  Predicted to enable protein kinase binding activity. Is an ortholog of C. elegans mel-11. In C. elegans, mel-11 is involved in embryo development and embryonic body morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

8 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm2006a.1 Bm2006a.1   [unknown]
Transcript:Bm2006c.1 Bm2006c.1   [unknown]
Transcript:Bm2006b.1 Bm2006b.1   [unknown]
Transcript:Bm2006e.1 Bm2006e.1   [unknown]
Transcript:Bm2006d.1 Bm2006d.1   [unknown]
Transcript:Bm2006g.1 Bm2006g.1   [unknown]
Transcript:Bm2006f.1 Bm2006f.1   [unknown]
Transcript:Bm2006h.1 Bm2006h.1   [unknown]
 

Other

8 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm2006c Bm2006c   [unknown]
CDS:Bm2006d Bm2006d   [unknown]
CDS:Bm2006e Bm2006e   [unknown]
CDS:Bm2006f Bm2006f   [unknown]
CDS:Bm2006a Bm2006a   [unknown]
CDS:Bm2006b Bm2006b   [unknown]
CDS:Bm2006g Bm2006g   [unknown]
CDS:Bm2006h Bm2006h   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

6 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Transcripts that showed significantly higher expression in L4 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Adult_Upregulated
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30
  Transcripts that showed significantly increased expression in male B. malayi 42 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M42_vs_M30
  Transcripts that showed significantly decreased expression in male B. malayi 30 days after infecting gerbils, comparing to L4 male B. malayi animals. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M30_vs_L4

0 Expression Patterns

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region