WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00222580 Gene Name  Bma-fln-2
Sequence Name  ? Bm2319 Organism  Brugia malayi
Automated Description  Predicted to enable actin filament binding activity. Predicted to be involved in actin cytoskeleton organization. Is an ortholog of C. elegans fln-2. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

7 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm2319a.1 Bm2319a.1   [unknown]
Transcript:Bm2319d.1 Bm2319d.1   [unknown]
Transcript:Bm2319e.1 Bm2319e.1   [unknown]
Transcript:Bm2319f.1 Bm2319f.1   [unknown]
Transcript:Bm2319b.1 Bm2319b.1   [unknown]
Transcript:Bm2319c.1 Bm2319c.1   [unknown]
Transcript:Bm2319g.1 Bm2319g.1   [unknown]
 

Other

7 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm2319a Bm2319a   [unknown]
CDS:Bm2319c Bm2319c   [unknown]
CDS:Bm2319b Bm2319b   [unknown]
CDS:Bm2319e Bm2319e   [unknown]
CDS:Bm2319d Bm2319d   [unknown]
CDS:Bm2319g Bm2319g   [unknown]
CDS:Bm2319f Bm2319f   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

5 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M30
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 42 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M42

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region