WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00222620 Gene Name  Bma-aha-1
Sequence Name  ? Bm2359 Organism  Brugia malayi
Automated Description  Predicted to enable DNA-binding transcription factor activity and protein dimerization activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in cytoplasm and nucleus. Predicted to be part of transcription regulator complex. Is an ortholog of C. elegans aha-1. In C. elegans, aha-1 is involved in several processes, including determination of adult lifespan; positive regulation of transcription by RNA polymerase II; and social behavior. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm2359c.1 Bm2359c.1   [unknown]
Transcript:Bm2359a.1 Bm2359a.1   [unknown]
Transcript:Bm2359b.1 Bm2359b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm2359b Bm2359b   [unknown]
CDS:Bm2359c Bm2359c   [unknown]
CDS:Bm2359a Bm2359a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated

0 Expression Patterns

6 GO Annotation

Annotation Extension Qualifier
  located_in
  located_in
  part_of
  enables
  involved_in
  enables

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  located_in
  located_in
  part_of
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region