WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00224294 Gene Name  Bma-isp-1.2
Sequence Name  ? Bm4033 Organism  Brugia malayi
Automated Description  Predicted to enable 2 iron, 2 sulfur cluster binding activity and ubiquinol-cytochrome-c reductase activity. Predicted to be located in membrane. Is an ortholog of C. elegans isp-1. In C. elegans, isp-1 is involved in mitochondrial electron transport, ubiquinol to cytochrome c; positive regulation of nematode larval development; and regulation of macromolecule metabolic process. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm4033a.1 Bm4033a.1   [unknown]
Transcript:Bm4033b.1 Bm4033b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm4033a Bm4033a   [unknown]
CDS:Bm4033b Bm4033b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_F120_vs_F30

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  enables
  located_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region