WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225076 Gene Name  Bma-ogt-1
Sequence Name  ? Bm4815 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: Tetratricopeptide repeat; Tetratricopeptide-like helical domain superfamily; O-GlcNAc transferase, C-terminal; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit; Tetratricopeptide repeat 1; TPR repeat; and Glycosyl transferase family 41. Is an ortholog of C. elegans ogt-1. In C. elegans, ogt-1 is involved in several processes, including dauer larval development; glycogen metabolic process; and lipid storage. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm4815a.1 Bm4815a.1   [unknown]
Transcript:Bm4815b.1 Bm4815b.1   [unknown]
Transcript:Bm4815c.1 Bm4815c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm4815c Bm4815c   [unknown]
CDS:Bm4815a Bm4815a   [unknown]
CDS:Bm4815b Bm4815b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region