WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225329 Gene Name  Bma-cnnm-3
Sequence Name  ? Bm5068 Organism  Brugia malayi
Automated Description  Predicted to be involved in magnesium ion homeostasis. Is an ortholog of C. elegans cnnm-3. In C. elegans, cnnm-3 is involved in several processes, including determination of adult lifespan; magnesium ion homeostasis; and positive regulation of developmental process. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm5068a.1 Bm5068a.1   [unknown]
Transcript:Bm5068b.1 Bm5068b.1   [unknown]
Transcript:Bm5068c.1 Bm5068c.1   [unknown]
Transcript:Bm5068d.1 Bm5068d.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm5068d Bm5068d   [unknown]
CDS:Bm5068b Bm5068b   [unknown]
CDS:Bm5068c Bm5068c   [unknown]
CDS:Bm5068a Bm5068a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120

0 Expression Patterns

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region