WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225528 Gene Name  Bma-clh-6
Sequence Name  ? Bm5267 Organism  Brugia malayi
Automated Description  Predicted to enable voltage-gated chloride channel activity. Predicted to be involved in chloride transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans clh-6. In C. elegans, clh-6 is involved in lysosomal protein catabolic process. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm5267b.1 Bm5267b.1   [unknown]
Transcript:Bm5267a.1 Bm5267a.1   [unknown]
Transcript:Bm5267c.1 Bm5267c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm5267c Bm5267c   [unknown]
CDS:Bm5267b Bm5267b   [unknown]
CDS:Bm5267a Bm5267a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in L4 larva comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Micro_Upregulated

0 Expression Patterns

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region