WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225648 Gene Name  Bma-nphp-4
Sequence Name  ? Bm5387 Organism  Brugia malayi
Automated Description  Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be located in cytoskeleton and non-motile cilium. Is an ortholog of C. elegans nphp-4. In C. elegans, nphp-4 is involved in several processes, including determination of adult lifespan; male mating behavior; and plasma membrane bounded cell projection organization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm5387.1 Bm5387.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm5387 Bm5387   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in L4 larva comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Micro_Upregulated

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region