WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00234581 Gene Name  Bma-fem-2
Sequence Name  ? Bm14320 Organism  Brugia malayi
Automated Description  Predicted to enable protein serine/threonine phosphatase activity. Is an ortholog of C. elegans fem-2. In C. elegans, fem-2 is involved in male sex determination; masculinization of hermaphroditic germ-line; and nematode male tail tip morphogenesis. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm14320.1 Bm14320.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm14320 Bm14320   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in parasites exposed to 20-hydroxyecdysone. edgeR was used to analyze the data using the counts generated for the four samples with Cuffdiff. WBPaper00049261:20-hydroxyecdysone_upregulated_RNAseq

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region