WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00238715 Gene Name  Ovo-ptrn-1
Sequence Name  ? OVOC1906 Organism  Onchocerca volvulus
Automated Description  Predicted to enable calmodulin binding activity and microtubule binding activity. Is an ortholog of C. elegans ptrn-1. In C. elegans, ptrn-1 is involved in cytoplasmic microtubule organization and nematode larval development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Onchocerca volvulus 6282

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:OVOC1906.1 OVOC1906.1   [unknown]
 

Other

0 CDSs

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Protein enriched at Day 3 in vitro culture of L3 larva stage of O.volvulus animals. N.A. WBPaper00050764:Ov-L3D3_enriched

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region