WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:2L52.1a.1 Sequence Name  2L52.1a.1
Length (nt)  2154   Chromosome Location  II: 1848-5514
Chromosome . Primary Identifier  II Chromosome Location . Start  1848
Chromosome Location . End  5514 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
2L52.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007063 2L52.1 2L52.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:2L52.1a 2L52.1a 1284   II: 1867-1911

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:2L52.1a.1 1848 5514 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37342   64   II: 1848-1911 Caenorhabditis elegans
Exon37343   189   II: 2506-2694 Caenorhabditis elegans
Exon37344   151   II: 2738-2888 Caenorhabditis elegans
Exon37345   106   II: 2931-3036 Caenorhabditis elegans
Exon37346   147   II: 3406-3552 Caenorhabditis elegans
Exon37348   183   II: 3802-3984 Caenorhabditis elegans
Exon37351   1314   II: 4201-5514 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:2L52.1a.1 1848 5514 1

1 Sequence

Length
2154

1 Sequence Ontology Term

Identifier Name Description
transcript