WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01B12.3.1 Sequence Name  C01B12.3.1
Length (nt)  1986   Chromosome Location  II: 12985-16004
Chromosome . Primary Identifier  II Chromosome Location . Start  12985
Chromosome Location . End  16004 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015286 best-3 C01B12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B12.3 C01B12.3 1839   II: 12986-13060

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01B12.3.1 12985 16004 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37369   76   II: 12985-13060 Caenorhabditis elegans
Exon37370   104   II: 13104-13207 Caenorhabditis elegans
Exon37371   135   II: 13251-13385 Caenorhabditis elegans
Exon37372   100   II: 13433-13532 Caenorhabditis elegans
Exon37373   222   II: 13579-13800 Caenorhabditis elegans
Exon37374   321   II: 13849-14169 Caenorhabditis elegans
Exon37375   149   II: 14577-14725 Caenorhabditis elegans
Exon37376   294   II: 14770-15063 Caenorhabditis elegans
Exon37377   124   II: 15114-15237 Caenorhabditis elegans
Exon37378   193   II: 15498-15690 Caenorhabditis elegans
Exon37379   268   II: 15737-16004 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01B12.3.1 12985 16004 1

1 Sequence

Length
1986

1 Sequence Ontology Term

Identifier Name Description
transcript