WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C01B12.1 Sequence Name  C01B12.1
Length (nt)  897   Chromosome Location  II: 23347-23508
Chromosome . Primary Identifier  II Chromosome Location . Start  23347
Chromosome Location . End  23508
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01B12.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07789 SQT-2 29.8 298 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00039245
WBRNAi00114950
WBRNAi00009885
WBRNAi00028261
WBRNAi00114996
WBRNAi00115034
WBRNAi00115072
WBRNAi00115091
WBRNAi00115053
WBRNAi00115006
WBRNAi00114971
WBRNAi00114962
WBRNAi00117933

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C01B12.1 23347 23508 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005017 sqt-2 C01B12.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C01B12.1 23347 23508 1
CDS:C01B12.1 23561 24220 1
CDS:C01B12.1 24273 24347 1

1 Sequence

Length
897

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C01B12.1.1 C01B12.1.1 1030   II: 23325-24458