WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23F1.1a.1 Sequence Name  F23F1.1a.1
Length (nt)  805   Chromosome Location  II: 43907-44917
Chromosome . Primary Identifier  II Chromosome Location . Start  43907
Chromosome Location . End  44917 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23F1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017742 nfyc-1 F23F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23F1.1a F23F1.1a 699   II: 43945-43977

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F23F1.1a.1 43907 44917 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37439   71   II: 43907-43977 Caenorhabditis elegans
Exon37440   90   II: 44034-44123 Caenorhabditis elegans
Exon37442   261   II: 44175-44435 Caenorhabditis elegans
Exon37444   244   II: 44481-44724 Caenorhabditis elegans
Exon37447   139   II: 44779-44917 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F23F1.1a.1 43907 44917 1

1 Sequence

Length
805

1 Sequence Ontology Term

Identifier Name Description
transcript