WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23F1.9.1 Sequence Name  F23F1.9.1
Length (nt)  1412   Chromosome Location  II: 45040-47479
Chromosome . Primary Identifier  II Chromosome Location . Start  45040
Chromosome Location . End  47479 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23F1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017749 rpoa-49 F23F1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23F1.9 F23F1.9 1299   II: 45045-45179

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F23F1.9.1 45040 47479 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37448   140   II: 45040-45179 Caenorhabditis elegans
Exon37449   150   II: 45229-45378 Caenorhabditis elegans
Exon37451   876   II: 46114-46989 Caenorhabditis elegans
Exon37452   246   II: 47234-47479 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F23F1.9.1 45040 47479 1

1 Sequence

Length
1412

1 Sequence Ontology Term

Identifier Name Description
transcript