WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23H3.3b.1 Sequence Name  C23H3.3b.1
Length (nt)  1235   Chromosome Location  II: 57670-60040
Chromosome . Primary Identifier  II Chromosome Location . Start  57670
Chromosome Location . End  60040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23H3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016019 ascc-1 C23H3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23H3.3b C23H3.3b 1182   II: 57672-57846

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C23H3.3b.1 57670 60040 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37473   177   II: 57670-57846 Caenorhabditis elegans
Exon37475   136   II: 58307-58442 Caenorhabditis elegans
Exon37477   125   II: 58493-58617 Caenorhabditis elegans
Exon37479   83   II: 58663-58745 Caenorhabditis elegans
Exon37481   102   II: 59174-59275 Caenorhabditis elegans
Exon37483   134   II: 59330-59463 Caenorhabditis elegans
Exon37485   343   II: 59523-59865 Caenorhabditis elegans
Exon37487   135   II: 59906-60040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C23H3.3b.1 57670 60040 1

1 Sequence

Length
1235

1 Sequence Ontology Term

Identifier Name Description
transcript