WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50D2.8a.1 Sequence Name  C50D2.8a.1
Length (nt)  1512   Chromosome Location  II: 95669-97944
Chromosome . Primary Identifier  II Chromosome Location . Start  95669
Chromosome Location . End  97944 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50D2.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016811 luc-7L3 C50D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50D2.8a C50D2.8a 960   II: 96219-96396

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50D2.8a.1 95669 97944 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37593   728   II: 95669-96396 Caenorhabditis elegans
Exon37597   53   II: 96755-96807 Caenorhabditis elegans
Exon37602   123   II: 97059-97181 Caenorhabditis elegans
Exon37606   255   II: 97242-97496 Caenorhabditis elegans
Exon37611   255   II: 97547-97801 Caenorhabditis elegans
Exon37615   98   II: 97847-97944 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50D2.8a.1 95669 97944 -1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
transcript