WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50D2.3.1 Sequence Name  C50D2.3.1
Length (nt)  575   Chromosome Location  II: 106189-107485
Chromosome . Primary Identifier  II Chromosome Location . Start  106189
Chromosome Location . End  107485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50D2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016807 txt-1 C50D2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50D2.3 C50D2.3 459   II: 106258-106326

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50D2.3.1 106189 107485 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37650   138   II: 106189-106326 Caenorhabditis elegans
Exon37651   157   II: 106531-106687 Caenorhabditis elegans
Exon37652   176   II: 106736-106911 Caenorhabditis elegans
Exon37653   104   II: 107382-107485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50D2.3.1 106189 107485 1

1 Sequence

Length
575

1 Sequence Ontology Term

Identifier Name Description
transcript