WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50D2.2.1 Sequence Name  C50D2.2.1
Length (nt)  2007   Chromosome Location  II: 109165-111429
Chromosome . Primary Identifier  II Chromosome Location . Start  109165
Chromosome Location . End  111429 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016806 C50D2.2 C50D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50D2.2 C50D2.2 1770   II: 109203-109413

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50D2.2.1 109165 111429 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37654   249   II: 109165-109413 Caenorhabditis elegans
Exon37655   251   II: 109467-109717 Caenorhabditis elegans
Exon37656   329   II: 109764-110092 Caenorhabditis elegans
Exon37657   373   II: 110149-110521 Caenorhabditis elegans
Exon37658   360   II: 110568-110927 Caenorhabditis elegans
Exon37659   445   II: 110985-111429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50D2.2.1 109165 111429 1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
transcript