WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10B4.1.1 Sequence Name  K10B4.1.1
Length (nt)  3885   Chromosome Location  II: 135466-139999
Chromosome . Primary Identifier  II Chromosome Location . Start  135466
Chromosome Location . End  139999 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019613 K10B4.1 K10B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10B4.1 K10B4.1 3885   II: 135466-135532

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10B4.1.1 135466 139999 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37723   67   II: 135466-135532 Caenorhabditis elegans
Exon37724   142   II: 135575-135716 Caenorhabditis elegans
Exon37725   399   II: 135765-136163 Caenorhabditis elegans
Exon37726   358   II: 136205-136562 Caenorhabditis elegans
Exon37727   357   II: 136608-136964 Caenorhabditis elegans
Exon37728   257   II: 137010-137266 Caenorhabditis elegans
Exon37729   408   II: 137316-137723 Caenorhabditis elegans
Exon37730   448   II: 137770-138217 Caenorhabditis elegans
Exon37731   202   II: 138263-138464 Caenorhabditis elegans
Exon37732   508   II: 138508-139015 Caenorhabditis elegans
Exon37733   108   II: 139060-139167 Caenorhabditis elegans
Exon37734   369   II: 139216-139584 Caenorhabditis elegans
Exon37735   151   II: 139627-139777 Caenorhabditis elegans
Exon37736   60   II: 139841-139900 Caenorhabditis elegans
Exon37737   51   II: 139949-139999 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10B4.1.1 135466 139999 1

1 Sequence

Length
3885

1 Sequence Ontology Term

Identifier Name Description
transcript