WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25D3.4a.1 Sequence Name  T25D3.4a.1
Length (nt)  2586   Chromosome Location  II: 147233-152825
Chromosome . Primary Identifier  II Chromosome Location . Start  147233
Chromosome Location . End  152825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25D3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020798 T25D3.4 T25D3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25D3.4a T25D3.4a 1653   II: 147273-147335

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25D3.4a.1 147233 152825 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37739   103   II: 147233-147335 Caenorhabditis elegans
Exon37740   57   II: 147389-147445 Caenorhabditis elegans
Exon37742   96   II: 147739-147834 Caenorhabditis elegans
Exon37744   78   II: 148206-148283 Caenorhabditis elegans
Exon37746   63   II: 148336-148398 Caenorhabditis elegans
Exon37749   219   II: 148828-149046 Caenorhabditis elegans
Exon37752   288   II: 149204-149491 Caenorhabditis elegans
Exon37755   263   II: 149882-150144 Caenorhabditis elegans
Exon37758   298   II: 150748-151045 Caenorhabditis elegans
Exon37763   1121   II: 151705-152825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25D3.4a.1 147233 152825 1

1 Sequence

Length
2586

1 Sequence Ontology Term

Identifier Name Description
transcript