WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D1.2f.1 Sequence Name  T01D1.2f.1
Length (nt)  2318   Chromosome Location  II: 163078-170166
Chromosome . Primary Identifier  II Chromosome Location . Start  163078
Chromosome Location . End  170166 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001340 etr-1 T01D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D1.2f T01D1.2f 1767   II: 163142-163324

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.2f.1 163078 170166 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37778   247   II: 163078-163324 Caenorhabditis elegans
Exon37807   238   II: 164406-164643 Caenorhabditis elegans
Exon37832   126   II: 164701-164826 Caenorhabditis elegans
Exon37857   80   II: 166071-166150 Caenorhabditis elegans
Exon37877   153   II: 166753-166905 Caenorhabditis elegans
Exon37907   118   II: 166961-167078 Caenorhabditis elegans
Exon37944   144   II: 167904-168047 Caenorhabditis elegans
Exon37969   219   II: 168175-168393 Caenorhabditis elegans
Exon37982   147   II: 168543-168689 Caenorhabditis elegans
Exon38025   231   II: 168793-169023 Caenorhabditis elegans
Exon38073   615   II: 169552-170166 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.2f.1 163078 170166 1

1 Sequence

Length
2318

1 Sequence Ontology Term

Identifier Name Description
transcript