WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:T01D1.2c Sequence Name  T01D1.2c
Length (nt)  2283   Chromosome Location  II: 163142-169679
Chromosome . Primary Identifier  II Chromosome Location . Start  163142
Chromosome Location . End  169679 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.2c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001340 etr-1 T01D1.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.2c 163142 169679 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon37793   183   II: 163142-163324 Caenorhabditis elegans
Exon37815   238   II: 164406-164643 Caenorhabditis elegans
Exon37846   126   II: 164701-164826 Caenorhabditis elegans
Exon37868   80   II: 166071-166150 Caenorhabditis elegans
Exon37891   153   II: 166753-166905 Caenorhabditis elegans
Exon37924   118   II: 166961-167078 Caenorhabditis elegans
Exon37930   213   II: 167174-167386 Caenorhabditis elegans
Exon37959   144   II: 167904-168047 Caenorhabditis elegans
Exon38013   141   II: 168549-168689 Caenorhabditis elegans
Exon38045   887   II: 168793-169679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.2c 163142 169679 1

1 Sequence

Length
2283

1 Sequence Ontology Term

Identifier Name Description
transcript