WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D1.7.1 Sequence Name  T01D1.7.1
Length (nt)  1443   Chromosome Location  II: 170846-173779
Chromosome . Primary Identifier  II Chromosome Location . Start  170846
Chromosome Location . End  173779 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044428 T01D1.7 T01D1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D1.7 T01D1.7 903   II: 171386-171577

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.7.1 170846 173779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38089   732   II: 170846-171577 Caenorhabditis elegans
Exon38090   114   II: 171625-171738 Caenorhabditis elegans
Exon38091   268   II: 171784-172051 Caenorhabditis elegans
Exon38093   193   II: 172410-172602 Caenorhabditis elegans
Exon38094   136   II: 173644-173779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.7.1 170846 173779 -1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
transcript