WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D1.6.1 Sequence Name  T01D1.6.1
Length (nt)  1295   Chromosome Location  II: 192509-194558
Chromosome . Primary Identifier  II Chromosome Location . Start  192509
Chromosome Location . End  194558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D1.6 T01D1.6 1188   II: 192592-192915

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.6.1 192509 194558 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38128   407   II: 192509-192915 Caenorhabditis elegans
Exon38129   570   II: 192978-193547 Caenorhabditis elegans
Exon38130   219   II: 193596-193814 Caenorhabditis elegans
Exon38131   99   II: 194460-194558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.6.1 192509 194558 -1

1 Sequence

Length
1295

1 Sequence Ontology Term

Identifier Name Description
transcript