WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43H11AL.1b.1 Sequence Name  Y43H11AL.1b.1
Length (nt)  1913   Chromosome Location  II: 222700-232739
Chromosome . Primary Identifier  II Chromosome Location . Start  222700
Chromosome Location . End  232739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43H11AL.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021545 Y43H11AL.1 Y43H11AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43H11AL.1b Y43H11AL.1b 1473   II: 223119-223211

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43H11AL.1b.1 222700 232739 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38241   512   II: 222700-223211 Caenorhabditis elegans
Exon38250   42   II: 223365-223406 Caenorhabditis elegans
Exon38259   94   II: 223704-223797 Caenorhabditis elegans
Exon38262   161   II: 226614-226774 Caenorhabditis elegans
Exon38270   119   II: 227936-228054 Caenorhabditis elegans
Exon38276   208   II: 229087-229294 Caenorhabditis elegans
Exon38282   220   II: 229852-230071 Caenorhabditis elegans
Exon38288   166   II: 230867-231032 Caenorhabditis elegans
Exon38295   330   II: 231700-232029 Caenorhabditis elegans
Exon38300   61   II: 232679-232739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43H11AL.1b.1 222700 232739 -1

1 Sequence

Length
1913

1 Sequence Ontology Term

Identifier Name Description
transcript