WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0432.13.2 Sequence Name  B0432.13.2
Length (nt)  1498   Chromosome Location  II: 278621-282583
Chromosome . Primary Identifier  II Chromosome Location . Start  278621
Chromosome Location . End  282583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0432.13.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015194 trul-1 B0432.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0432.13 B0432.13 1356   II: 279186-279465

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0432.13.2 278621 282583 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38444   116   II: 278621-278736 Caenorhabditis elegans
Exon38446   284   II: 279182-279465 Caenorhabditis elegans
Exon38448   161   II: 279738-279898 Caenorhabditis elegans
Exon38450   180   II: 280434-280613 Caenorhabditis elegans
Exon38452   115   II: 281161-281275 Caenorhabditis elegans
Exon38454   108   II: 281318-281425 Caenorhabditis elegans
Exon38456   248   II: 281473-281720 Caenorhabditis elegans
Exon38460   286   II: 282298-282583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0432.13.2 278621 282583 -1

1 Sequence

Length
1498

1 Sequence Ontology Term

Identifier Name Description
transcript