WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0432.13.1 Sequence Name  B0432.13.1
Length (nt)  1422   Chromosome Location  II: 279135-282576
Chromosome . Primary Identifier  II Chromosome Location . Start  279135
Chromosome Location . End  282576 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0432.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015194 trul-1 B0432.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0432.13 B0432.13 1356   II: 279186-279465

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0432.13.1 279135 282576 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38445   331   II: 279135-279465 Caenorhabditis elegans
Exon38447   161   II: 279738-279898 Caenorhabditis elegans
Exon38449   180   II: 280434-280613 Caenorhabditis elegans
Exon38451   115   II: 281161-281275 Caenorhabditis elegans
Exon38453   108   II: 281318-281425 Caenorhabditis elegans
Exon38455   248   II: 281473-281720 Caenorhabditis elegans
Exon38459   279   II: 282298-282576 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0432.13.1 279135 282576 -1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
transcript