WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A2.5a.2 Sequence Name  K01A2.5a.2
Length (nt)  987   Chromosome Location  II: 301273-303665
Chromosome . Primary Identifier  II Chromosome Location . Start  301273
Chromosome Location . End  303665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A2.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019280 K01A2.5 K01A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A2.5a K01A2.5a 798   II: 302415-302696

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.5a.2 301273 303665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38504   116   II: 301273-301388 Caenorhabditis elegans
Exon38505   292   II: 302405-302696 Caenorhabditis elegans
Exon38508   154   II: 302756-302909 Caenorhabditis elegans
Exon38510   112   II: 303121-303232 Caenorhabditis elegans
Exon38512   313   II: 303353-303665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.5a.2 301273 303665 1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript